Tamer Abdulbaki Alshirbaji
Akademischer Mitarbeiter Projekt CoHMED
Publications
Abdulbaki Alshirbaji, Tamer
2022 |
|||
| Nour A. Jalal, Herag Arabian, Tamer Abdulbaki Alshirbaji, Paul D. Docherty, Thomas Neumuth, Knut Möller | Analysing attention convolutional neural network for surgical tool localisation: a feasibility study | Current Directions in Biomedical Engineering, 8.2022(2), pp. 548-551, 2022 | BibTeX | RIS DOI URN |
| Herag Arabian, Firas Abou Dalla, Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | Attention Networks for Improving Surgical Tool Classification in Laparoscopic Videos | Current Directions in Biomedical Engineering, 8.2022(2), pp. 676-679, 2022 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | Improving the Generalisability of Deep CNNs by Combining Multi-stage Features for Surgical Tool Classification | 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), 11-15 July 2022, Glasgow, Scotland, United Kingdom, pp. 533-536, 2022 | BibTeX | RIS 978-1-7281-2782-8, DOI |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | Neural Network Classification of Surgical Tools in Gynecological Videos | Current Directions in Biomedical Engineering, 8.2022(2), pp. 644-647, 2022 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | Robustness of Convolutional Neural Networks for Surgical Tool Classification in Laparoscopic Videos from Multiple Sources and of Multiple Types: A Systematic Evaluation | electronics, 11.2022(18), 2022 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Thomas Neumuth, Knut Möller | Spatial-temporal Modelling for Surgical Tool Classification in Cholecystectomy Videos | The Upper-Rhine Artificial Intelligence Symposium UR-AI 2022 : AI Applications in Medicine and Manufacturing, 19 October 2022, Villingen-Schwenningen, Germany, pp. 158-161, 2022 | BibTeX | RIS 978-3-00-073637-7, URN |
2021 |
|||
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Paul D. Docherty, Thomas Neumuth, Knut Möller | A Deep Learning Framework for Recognising Surgical Phases in Laparoscopic Videos | IFAC-PapersOnLine, 54.2021(15), pp. 334-339, 2021 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | A deep learning spatial-temporal framework for detecting surgical tools in laparoscopic videos | Biomedical Signal Processing and Control, 68.2021(July 2021), 2021 | BibTeX | RIS DOI |
| Ning Ding, Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | Adversarial samples of a trained convolutional neural network model | AUTOMED 2021 - Automatisierung in der Medizintechnik, 15. Interdisziplinäres Symposium, 08. - 09. Juni 2021, Basel, Switzerland, 2021 | BibTeX | RIS DOI |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | Assessing Generalisation Capabilities of CNN Models for Surgical Tool Classification | Current Directions in Biomedical Engineering, 7.2021(2), pp. 476-479, 2021 | BibTeX | RIS DOI URN |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Bernhard Laufer, Paul D. Docherty, Thomas Neumuth, Knut Möller | Changes of Physiological parameters of the patient during laparoscopic gynaecology | Current Directions in Biomedical Engineering, 07.2021(2), pp. 500-503, 2021 | BibTeX | RIS DOI URN |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Bernhard Laufer, Paul D. Docherty, Thomas Neumuth, Knut Möller | Correlation between intra-abdominal pressure and lung mechanics during laparoscopic gynecology | AUTOMED 2021 - Automatisierung in der Medizintechnik, 15. Interdisziplinäres Symposium, 08. - 09. Juni 2021, Basel, Switzerland, 2021 | BibTeX | RIS DOI |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Paul D. Docherty, Thomas Neumuth, Knut Möller | Cross-dataset evaluation of a CNN-based approach for surgical tool detection | AUTOMED 2021 - Automatisierung in der Medizintechnik, 15. Interdisziplinäres Symposium, 08. - 09. Juni 2021, Basel, Switzerland, 2021 | BibTeX | RIS DOI |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Bernhard Laufer, Paul D. Docherty, S. G. Russo, Thomas Neumuth, Knut Möller | Effects of Intra-Abdominal Pressure on Lung Mechanics during Laparoscopic Gynaecology | 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), November 1 - November 5, 2021, virtual, pp. 2091-2094, 2021 | BibTeX | RIS 978-1-7281-1179-7, DOI |
2020 |
|||
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | A convolutional neural network with a two-stage LSTM model for tool presence detection in laparoscopic videos | Current Directions in Biomedical Engineering, 06.2020(1 Artikel 0200002), 2020 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Data Recording Framework for Physiological and Surgical Data in Operating Theatres | Current Directions in Biomedical Engineering, 06.2020(3), pp. 364-367, 2020 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Der vernetzte Operationssaal | 2020 | BibTeX | RIS |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Paul D. Docherty, Thomas Neumuth, Knut Möller | Surgical Tool Detection in Laparoscopic Videos by Modeling Temporal Dependencies Between Adjacent Frames | 8th European Medical and Biological Engineering Conference Proceedings of the EMBEC 2020, November 29 – December 3, 2020 Portorož, Slovenia, pp. 1045-1052, 2020 | BibTeX | RIS 978-3-030-64610-3, DOI |
| Tamer Abdulbaki Alshirbaji, N. Ding, Nour A. Jalal, Knut Möller | The effect of background pattern on training a deep convolutional neural network for surgical tool detection | Contributions to the 14th Symposium on Automation in Medical Engineering (AUTOMED 2020), March 02/03 2020, Lübeck, Germany, 2020 | BibTeX | RIS DOI |
| N. Ding, Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | The evaluation of synthetic datasets on training AlexNet for surgical tool detection | Current Directions in Biomedical Engineering, 06.2020(3), pp. 319-321, 2020 | BibTeX | RIS DOI URN |
2019 |
|||
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Lars Mündermann, Knut Möller | Data Recording System for Anesthesiology, Patient Monitor and Surgical Devices in Operating Rooms | 64. Jahrestagung der Deutschen Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie e. V. (GMDS), 08.-11.09.2019, Dortmund, Germany, 2019 | BibTeX | RIS DOI URN |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | Predicting Surgical Phases using CNN-NARX Neural Network | Current Directions in Biomedical Engineering, 05.2019(1), pp. 405-407, 2019 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Prediction of Surgery Duration from Laparoscopic Videos using Recurrent neural network | Biomedical Engineering / Biomedizinische Technik, 64.2019(s2), p. s140, 2019 | BibTeX | RIS DOI |
2018 |
|||
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | Evaluating Convolutional Neural Network and Hidden Markov Model for Recognising Surgical Phases in Sigmoid Resection | Current Directions in Biomedical Engineering, 4.2018(1), pp. 415-418, 2018 | BibTeX | RIS DOI URN |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Laparoscopic Instrument Classification using a Loss- Sensitive Neural Network | Automed 2018: Automatisierungstechnische Verfahren für die Medizin, 15. und 16. März 2018 in Villingen-Schwenningen, Tagungsband, pp. 58-60, 2018 | BibTeX | RIS 978-3-95853-384-4, |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | Phase recognition in laparoscopic videos: comparing Hierarchical HMM with simple HMM | World Congress on Medical Physics & Biomedical Engineering IUPESM, 3-8 June 2018, Prag, Czech Republic, 2018 | BibTeX | RIS |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Surgical Tool Classification in Laparoscopic Videos Using Convolutional Neural Network | Current Directions in Biomedical Engineering, 4.2018(1), pp. 407-410, 2018 | BibTeX | RIS DOI URN |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Knut Möller | The effect of Hierarchical Hidden Markov Model on Phase Recognition in Laparoscopic Videos | Automed 2018: Automatisierungstechnische Verfahren für die Medizin, 15. und 16. März 2018 in Villingen-Schwenningen, Tagungsband, pp. 61-63, 2018 | BibTeX | RIS 978-3-95853-384-4, |
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Knut Möller | Video-based surgical tool classification in endoscopic cholecystectomies | World Congress on Medical Physics & Biomedical Engineering IUPESM, 3-8 June 2018, Prag, Czech Republic, 2018 | BibTeX | RIS |
2017 |
|||
| Tamer Abdulbaki Alshirbaji, Nour A. Jalal, Lars Mündermann, Knut Möller | Classifying smoke in laparoscopic videos using SVM | Current Directions in Biomedical Engineering, 3.2017(2), pp. 191-194, 2017 | BibTeX | RIS DOI URN |
| Nour A. Jalal, Tamer Abdulbaki Alshirbaji, Lars Mündermann, Knut Möller | Features for detecting smoke in laparoscopic videos | Current Directions in Biomedical Engineering, 3.2017(2), pp. 521-524, 2017 | BibTeX | RIS DOI URN |